Fungal Biotechnology Microbial Genomes

JBEI researchers are interested in understanding how lignin is degraded and mineralized in nature, so they can develop lignin deconstruction technologies that can be deployed in a lignocellulosic biorefinery. To better understand microbial lignin degradation, scientists isolated a library of microbes able to grow on lignin as a sole carbon source, then sequenced their genomes at the Joint Genome Institute (JGI).

PLEASE NOTE: To access the isolate genome information on the Integrated Microbial Genomics (IMG) website, users must create an IMG or JGI SSO account.

Isolate Genomes in JGI IMG Database

IMG Submission ID

Aminobacter sp. J15 2786
Aminobacter sp. J44 2787
Bacillus ginsengihumi J57 6271
Bacillus subtilus J22 2788
Bacillus subtilus J23 2789
Bacillus subtilus J24 2790
Bacillus subtilus J25 2791
Bacillus subtilus J26 2793
Bacillus subtilus J27 2794
Cellulosimicrobium cellulans J34 2796
Cupriavidus gilardii J11 2797
Gordonia westfalica J30 2798
Isoptericola variabilis 225 2816
Isoptericola variabilis J5 2495
Isoptericola variabilis J7 2800
Luteimonas sp. J16 2802
Luteimonas sp. J29 6902
Mesorhizobium sp. J18 2803
Micrococcus luteus J28 2804
Nocardioides sp. J9 2805
Ochrobactrum intermedium J2 2493
Ochrobactrum sp. J50 2806
Paenibacillus lactis 154 5873
Paenibacillus sp. J10 2811
Paracoccus sp. J55 6447
Pseudomonas fulva 12-X 2832
Pseudomonas thermotolerans J53 6443
Pseudoxanthomonas sp. J35 6448
Pseudoxanthomonas suwonensis 11-1 (N/A)
Pseudoxanthomonas suwonensis J42 6445
Pseudoxanthomonas taiwanensis J19 2812
Rhodococcus rhodochrous J38 2813
Rhodococcus rhodochrous J45 2814
Rhodococcus sp. J21 2815
Rhodothermus marinus SG0.5JP17-171 5718
Rhodothermus marinus SG0.5JP17-172 2828
Sphingobacterium sp. 21 2830
Thermus thermophilus SG0.5JP17-16 2827